Alignment Type

Detailed Description

The alignment type specifies how to penalize gaps at the beginning and end of the pattern and text.

Enumerations
enum	nvbio::aln::AlignmentType { nvbio::aln::GLOBAL, nvbio::aln::LOCAL, nvbio::aln::SEMI_GLOBAL }

Enumeration Type Documentation

enum nvbio::aln::AlignmentType

alignment type specifier

Enumerator
GLOBAL
LOCAL
SEMI_GLOBAL

Definition at line 54 of file alignment_base.h.