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sequence_access.h File Reference
#include <nvbio/strings/alphabet.h>
#include <nvbio/io/sequence/sequence_traits.h>
#include <nvbio/basic/packedstream.h>
#include <nvbio/basic/vector_view.h>
#include <nvbio/strings/string_set.h>

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Classes

struct  nvbio::io::SequenceDataAccess< SEQUENCE_ALPHABET_T, SequenceDataT >
 
struct  nvbio::io::SequenceDataEdit< SEQUENCE_ALPHABET_T, SequenceDataT >
 

Namespaces

 nvbio
 Define a vector_view POD type and plain_view() for std::vector.
 
 nvbio::io
 

Functions

template<Alphabet ALPHABET, typename SequenceDataT >
SequenceDataAccess< ALPHABET,
SequenceDataT > 
nvbio::io::make_access (const SequenceDataT &data)