Detailed description

Definition at line 67 of file utils.h.

#include <utils.h>

Public Methods
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE	KmerCode ()

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE	KmerCode (const int l)

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE	KmerCode (const KmerCode &k)

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	restart ()

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	push_back (const uint8 c)

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	push_front (const uint8 c)

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	shift_right (int k)

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	is_valid () const

Constructor & Destructor Documentation

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE KmerCode::KmerCode ( )

inline

Definition at line 70 of file utils.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE KmerCode::KmerCode ( const int l)

inline

Definition at line 73 of file utils.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE KmerCode::KmerCode ( const KmerCode & k)

inline

Definition at line 82 of file utils.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool KmerCode::is_valid ( ) const

inline

Definition at line 124 of file utils.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void KmerCode::push_back ( const uint8 c)

inline

Definition at line 89 of file utils.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void KmerCode::push_front ( const uint8 c)

inline

Definition at line 102 of file utils.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void KmerCode::restart ( )

inline

Definition at line 86 of file utils.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void KmerCode::shift_right ( int k)

inline

Definition at line 113 of file utils.h.

uint64 KmerCode::code

Definition at line 127 of file utils.h.

int KmerCode::invalid

Definition at line 129 of file utils.h.

int KmerCode::len

Definition at line 128 of file utils.h.

uint64 KmerCode::mask

Definition at line 126 of file utils.h.

The documentation for this struct was generated from the following file: