bam1_core_t Struct Reference

Detailed description

Definition at line 119 of file sam.h.

#include <sam.h>

Public Members
int32_t	tid
int32_t	pos
uint32_t	bin:16
uint32_t	qual:8
uint32_t	l_qname:8
uint32_t	flag:16
uint32_t	n_cigar:16
int32_t	l_qseq
int32_t	mtid
int32_t	mpos
int32_t	isize

Member Data Documentation

uint32_t bam1_core_t::bin

Definition at line 122 of file sam.h.

uint32_t bam1_core_t::flag

Definition at line 123 of file sam.h.

int32_t bam1_core_t::isize

Definition at line 127 of file sam.h.

uint32_t bam1_core_t::l_qname

Definition at line 122 of file sam.h.

int32_t bam1_core_t::l_qseq

Definition at line 124 of file sam.h.

int32_t bam1_core_t::mpos

Definition at line 126 of file sam.h.

int32_t bam1_core_t::mtid

Definition at line 125 of file sam.h.

uint32_t bam1_core_t::n_cigar

Definition at line 123 of file sam.h.

int32_t bam1_core_t::pos

Definition at line 121 of file sam.h.

uint32_t bam1_core_t::qual

Definition at line 122 of file sam.h.

int32_t bam1_core_t::tid

Definition at line 120 of file sam.h.

---

The documentation for this struct was generated from the following file:

• E:/git/nvbio/contrib/htslib/htslib/sam.h