Detailed description

Definition at line 739 of file kmers_inl.h.

#include <kmers_inl.h>

Inheritance diagram for num_non_overlapped_repeats:

Public Methods
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE	num_non_overlapped_repeats (const SequenceSetKmerCoord _coords, const uint32 _suffix_kmer_ids, const uint32 *_overlaps, const uint32 _kmer_size)

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint32	operator() (const uint32 idx) const

Public Members
const SequenceSetKmerCoord *	coords

const uint32 *	suffix_kmer_ids

const uint32 *	overlaps

const uint32	kmer_size

Constructor & Destructor Documentation

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE num_non_overlapped_repeats::num_non_overlapped_repeats	(	const SequenceSetKmerCoord *	_coords,
		const uint32 *	_suffix_kmer_ids,
		const uint32 *	_overlaps,
		const uint32	_kmer_size
	)

inline

Definition at line 747 of file kmers_inl.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint32 num_non_overlapped_repeats::operator() ( const uint32 idx) const

inline

Definition at line 754 of file kmers_inl.h.

const SequenceSetKmerCoord* num_non_overlapped_repeats::coords

Definition at line 741 of file kmers_inl.h.

const uint32 num_non_overlapped_repeats::kmer_size

Definition at line 744 of file kmers_inl.h.

const uint32* num_non_overlapped_repeats::overlaps

Definition at line 743 of file kmers_inl.h.

const uint32* num_non_overlapped_repeats::suffix_kmer_ids

Definition at line 742 of file kmers_inl.h.

The documentation for this struct was generated from the following file: