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num_non_overlapped_repeats Struct Reference

Detailed description

Definition at line 739 of file kmers_inl.h.

#include <kmers_inl.h>

Inheritance diagram for num_non_overlapped_repeats:

Public Methods

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE num_non_overlapped_repeats (const SequenceSetKmerCoord *_coords, const uint32 *_suffix_kmer_ids, const uint32 *_overlaps, const uint32 _kmer_size)
operator() (const uint32 idx) const

Public Members

const SequenceSetKmerCoordcoords
const uint32suffix_kmer_ids
const uint32overlaps
const uint32 kmer_size

Constructor & Destructor Documentation

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE num_non_overlapped_repeats::num_non_overlapped_repeats ( const SequenceSetKmerCoord _coords,
const uint32 _suffix_kmer_ids,
const uint32 _overlaps,
const uint32  _kmer_size 

Definition at line 747 of file kmers_inl.h.

Member Function Documentation

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint32 num_non_overlapped_repeats::operator() ( const uint32  idx) const

Definition at line 754 of file kmers_inl.h.

Member Data Documentation

const SequenceSetKmerCoord* num_non_overlapped_repeats::coords

Definition at line 741 of file kmers_inl.h.

const uint32 num_non_overlapped_repeats::kmer_size

Definition at line 744 of file kmers_inl.h.

const uint32* num_non_overlapped_repeats::overlaps

Definition at line 743 of file kmers_inl.h.

const uint32* num_non_overlapped_repeats::suffix_kmer_ids

Definition at line 742 of file kmers_inl.h.

The documentation for this struct was generated from the following file: