nvbio::BWTBGZWriter Struct Reference

Detailed description

A class to output the BWT to an BGZ-compressed binary file

Definition at line 75 of file file_bwt_bgz.h.

#include <file_bwt_bgz.h>

Public Methods
	BWTBGZWriter ()
	~BWTBGZWriter ()
void	open (const char *output_name, const char *index_name, const char *compression)
	open More...
uint32	bwt_write (const uint32 n_bytes, const void *buffer)
uint32	index_write (const uint32 n_bytes, const void *buffer)
bool	is_ok () const

Constructor & Destructor Documentation

nvbio::BWTBGZWriter::BWTBGZWriter

(

)

constructor

nvbio::BWTBGZWriter::~BWTBGZWriter

(

)

destructor

Member Function Documentation

uint32 nvbio::BWTBGZWriter::bwt_write	(	const uint32	n_bytes,
		const void *	buffer
	)

write to the bwt

uint32 nvbio::BWTBGZWriter::index_write	(	const uint32	n_bytes,
		const void *	buffer
	)

write to the index

bool nvbio::BWTBGZWriter::is_ok

(

)

const

return whether the file is in a good state

void nvbio::BWTBGZWriter::open	(	const char *	output_name,
		const char *	index_name,
		const char *	compression
	)

open

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/nvbio/sufsort/file_bwt_bgz.h