nvbio::bowtie2::cuda::DebugState Struct Reference

Detailed description

A helper class to track debugging info

Definition at line 116 of file defs.h.

#include <defs.h>

Public Methods
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	show_select (const uint32 id) const
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	show_locate (const uint32 id) const
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	show_score (const uint32 id, const bool good) const
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	show_score_info (const uint32 id) const
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	show_reduce (const uint32 id) const
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	show_traceback (const uint32 id) const

Public Members
uint32	read_id
bool	select
bool	locate
bool	score
bool	score_bad
bool	score_info
bool	reduce
bool	traceback
bool	asserts

Member Function Documentation

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool nvbio::bowtie2::cuda::DebugState::show_locate ( const uint32  id) const

inline

Definition at line 129 of file defs.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool nvbio::bowtie2::cuda::DebugState::show_reduce ( const uint32  id) const

inline

Definition at line 132 of file defs.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool nvbio::bowtie2::cuda::DebugState::show_score ( const uint32  id, const bool  good  ) const

inline

Definition at line 130 of file defs.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool nvbio::bowtie2::cuda::DebugState::show_score_info ( const uint32  id) const

inline

Definition at line 131 of file defs.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool nvbio::bowtie2::cuda::DebugState::show_select ( const uint32  id) const

inline

Definition at line 128 of file defs.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool nvbio::bowtie2::cuda::DebugState::show_traceback ( const uint32  id) const

inline

Definition at line 133 of file defs.h.

Member Data Documentation

bool nvbio::bowtie2::cuda::DebugState::asserts

Definition at line 126 of file defs.h.

bool nvbio::bowtie2::cuda::DebugState::locate

Definition at line 120 of file defs.h.

uint32 nvbio::bowtie2::cuda::DebugState::read_id

Definition at line 118 of file defs.h.

bool nvbio::bowtie2::cuda::DebugState::reduce

Definition at line 124 of file defs.h.

bool nvbio::bowtie2::cuda::DebugState::score

Definition at line 121 of file defs.h.

bool nvbio::bowtie2::cuda::DebugState::score_bad

Definition at line 122 of file defs.h.

bool nvbio::bowtie2::cuda::DebugState::score_info

Definition at line 123 of file defs.h.

bool nvbio::bowtie2::cuda::DebugState::select

Definition at line 119 of file defs.h.

bool nvbio::bowtie2::cuda::DebugState::traceback

Definition at line 125 of file defs.h.

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/nvBowtie/bowtie2/cuda/defs.h