nvbio::bowtie2::cuda::FMIndexDef Struct Reference

Detailed description

Definition at line 37 of file fmindex_def.h.

#include <fmindex_def.h>

Public Types
typedef io::FMIndexDataDevice::count_table_type	count_table_type
typedef io::FMIndexDataDevice::occ_type	occ_type
typedef io::FMIndexDataDevice::bwt_type	bwt_type
typedef io::FMIndexDataDevice::ssa_type	ssa_type
typedef io::FMIndexDataDevice::rank_dict_type	rank_dict_type
typedef io::FMIndexDataDevice::fm_index_type	type

Member Typedef Documentation

typedef io::FMIndexDataDevice::bwt_type nvbio::bowtie2::cuda::FMIndexDef::bwt_type

Definition at line 41 of file fmindex_def.h.

typedef io::FMIndexDataDevice::count_table_type nvbio::bowtie2::cuda::FMIndexDef::count_table_type

Definition at line 39 of file fmindex_def.h.

typedef io::FMIndexDataDevice::occ_type nvbio::bowtie2::cuda::FMIndexDef::occ_type

Definition at line 40 of file fmindex_def.h.

typedef io::FMIndexDataDevice::rank_dict_type nvbio::bowtie2::cuda::FMIndexDef::rank_dict_type

Definition at line 43 of file fmindex_def.h.

typedef io::FMIndexDataDevice::ssa_type nvbio::bowtie2::cuda::FMIndexDef::ssa_type

Definition at line 42 of file fmindex_def.h.

typedef io::FMIndexDataDevice::fm_index_type nvbio::bowtie2::cuda::FMIndexDef::type

Definition at line 44 of file fmindex_def.h.

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/nvBowtie/bowtie2/cuda/fmindex_def.h