Detailed description

A simple POD struct to represent a seed's information in a packed uint32:

Definition at line 171 of file defs.h.

#include <defs.h>

Public Methods
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE	packed_seed ()

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE	packed_seed (const uint32 _pos_in_read, const uint32 _index_dir, const uint32 _rc, const uint32 _top_flag)

Constructor & Destructor Documentation

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE nvbio::bowtie2::cuda::packed_seed::packed_seed ( )

inline

Definition at line 174 of file defs.h.

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE nvbio::bowtie2::cuda::packed_seed::packed_seed	(	const uint32	_pos_in_read,
		const uint32	_index_dir,
		const uint32	_rc,
		const uint32	_top_flag
	)

inline

Definition at line 177 of file defs.h.

uint32 nvbio::bowtie2::cuda::packed_seed::index_dir

Definition at line 180 of file defs.h.

uint32 nvbio::bowtie2::cuda::packed_seed::pos_in_read

Definition at line 180 of file defs.h.

uint32 nvbio::bowtie2::cuda::packed_seed::rc

Definition at line 180 of file defs.h.

uint32 nvbio::bowtie2::cuda::packed_seed::top_flag

Definition at line 180 of file defs.h.

The documentation for this struct was generated from the following file: