NVBIO: nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN > Struct Template Reference

Detailed description

template< uint32 SYMBOL_SIZE, bool BIG_ENDIAN>
struct nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >

Definition at line 590 of file paged_text_inl.h.

#include <paged_text_inl.h>

Public Types
typedef PagedText< SYMBOL_SIZE, BIG_ENDIAN >	paged_text_type

typedef paged_text_type::word_type	word_type

typedef paged_text_type::const_packed_page_type	const_packed_page_type

typedef paged_text_type::packed_page_type	packed_page_type

Public Methods
	copy_insert_pages (const uint32 _N, const uint32 _in_leaves, const uint32 _leaf_ids, const uint64 _g, const uint8 _c, paged_text_type _text)

NVBIO_FORCEINLINE void	alloc_page (const uint32 k_out, uint32 partials, uint32 out_leaf, word_type *out_page, packed_page_type out_stream, uint32 **occ) const

void	operator() (const uint32 in_leaf) const

Public Members
const uint32	N

const uint32	in_leaves

const uint32 *	leaf_ids

const uint64 *	g

const uint8 *	c

paged_text_type *	text

Static Public Members
static const uint32	SYMBOL_COUNT = 1u << SYMBOL_SIZE

Member Typedef Documentation

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

typedef paged_text_type::const_packed_page_type nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::const_packed_page_type

Definition at line 596 of file paged_text_inl.h.

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

typedef paged_text_type::packed_page_type nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::packed_page_type

Definition at line 597 of file paged_text_inl.h.

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

typedef PagedText<SYMBOL_SIZE,BIG_ENDIAN> nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::paged_text_type

Definition at line 594 of file paged_text_inl.h.

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

typedef paged_text_type::word_type nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::word_type

Definition at line 595 of file paged_text_inl.h.

Constructor & Destructor Documentation

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::copy_insert_pages	(	const uint32	_N,
		const uint32	_in_leaves,
		const uint32 *	_leaf_ids,
		const uint64 *	_g,
		const uint8 *	_c,
		paged_text_type *	_text
	)

inline

Definition at line 599 of file paged_text_inl.h.

Member Function Documentation

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

NVBIO_FORCEINLINE void nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::alloc_page	(	const uint32	k_out,
		uint32 *	partials,
		uint32 *	out_leaf,
		word_type **	out_page,
		packed_page_type *	out_stream,
		uint32 **	occ
	)		const

inline

Definition at line 615 of file paged_text_inl.h.

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

void nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::operator() ( const uint32 in_leaf) const

inline

Definition at line 656 of file paged_text_inl.h.

Member Data Documentation

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

const uint8* nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::c

Definition at line 841 of file paged_text_inl.h.

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

const uint64* nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::g

Definition at line 840 of file paged_text_inl.h.

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

const uint32 nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::in_leaves

Definition at line 838 of file paged_text_inl.h.

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

const uint32* nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::leaf_ids

Definition at line 839 of file paged_text_inl.h.

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

const uint32 nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::N

Definition at line 837 of file paged_text_inl.h.

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

const uint32 nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::SYMBOL_COUNT = 1u << SYMBOL_SIZE

static

Definition at line 592 of file paged_text_inl.h.

template<uint32 SYMBOL_SIZE, bool BIG_ENDIAN>

paged_text_type* nvbio::copy_insert_pages< SYMBOL_SIZE, BIG_ENDIAN >::text

Definition at line 842 of file paged_text_inl.h.

The documentation for this struct was generated from the following file:

E:/git/nvbio/nvbio/fmindex/paged_text_inl.h