s_align Struct Reference

Detailed description

Definition at line 47 of file ssw.h.

#include <ssw.h>

Public Members
uint16_t	score1
uint16_t	score2
int32_t	ref_begin1
int32_t	ref_end1
int32_t	read_begin1
int32_t	read_end1
int32_t	ref_end2
uint32_t *	cigar
int32_t	cigarLen

Member Data Documentation

uint32_t* s_align::cigar

Definition at line 55 of file ssw.h.

int32_t s_align::cigarLen

Definition at line 56 of file ssw.h.

int32_t s_align::read_begin1

Definition at line 52 of file ssw.h.

int32_t s_align::read_end1

Definition at line 53 of file ssw.h.

int32_t s_align::ref_begin1

Definition at line 50 of file ssw.h.

int32_t s_align::ref_end1

Definition at line 51 of file ssw.h.

int32_t s_align::ref_end2

Definition at line 54 of file ssw.h.

uint16_t s_align::score1

Definition at line 48 of file ssw.h.

uint16_t s_align::score2

Definition at line 49 of file ssw.h.

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/sw-benchmark/ssw.h