sufsort_utils.h File Reference

#include <nvbio/sufsort/sufsort_priv.h>
#include <nvbio/strings/string_set.h>
#include <nvbio/basic/thrust_view.h>
#include <nvbio/basic/vector.h>
#include <thrust/host_vector.h>
#include <thrust/device_vector.h>

Go to the source code of this file.

Classes
struct	nvbio::SetBWTHandler
struct	nvbio::DeviceBWTHandler< OutputIterator >
struct	nvbio::HostBWTHandler< OutputIterator >
struct	nvbio::HostBWTHandler< PackedStream< word_type *, uint8, SYMBOL_SIZE, BIG_ENDIAN, uint64 > >
struct	nvbio::DiscardBWTHandler
struct	nvbio::StringBWTHandler< string_type, output_iterator >
struct	nvbio::StringSSAHandler< output_iterator >
struct	nvbio::StringBWTSSAHandler< string_type, output_bwt_iterator, output_ssa_iterator >

Namespaces
	nvbio
	Define a vector_view POD type and plain_view() for std::vector.