seed_hit_deque_array.h File Reference

#include <nvBowtie/bowtie2/cuda/defs.h>
#include <nvBowtie/bowtie2/cuda/seed_hit.h>
#include <nvbio/basic/cuda/pingpong_queues.h>
#include <nvbio/basic/cuda/arch.h>
#include <nvbio/basic/thrust_view.h>
#include <nvbio/basic/priority_deque.h>
#include <nvbio/basic/sum_tree.h>
#include <nvbio/basic/vector_view.h>
#include <nvbio/basic/vector.h>
#include <algorithm>
#include <nvBowtie/bowtie2/cuda/seed_hit_deque_array_inl.h>

Go to the source code of this file.

Classes
struct	nvbio::bowtie2::cuda::SeedHitDequeReference< SeedHitDequeArrayType >
struct	nvbio::bowtie2::cuda::SeedHitDequeArrayDeviceStorage
struct	nvbio::bowtie2::cuda::SeedHitDequeArrayHostStorage
struct	nvbio::bowtie2::cuda::SeedHitDequeArray
struct	nvbio::bowtie2::cuda::SeedHitDequeArrayDeviceView
struct	nvbio::bowtie2::cuda::SeedHitDequeReference< SeedHitDequeArrayType >

Namespaces
	nvbio
	Define a vector_view POD type and plain_view() for std::vector.
	nvbio::bowtie2
	nvbio::bowtie2::cuda