bcf_srs_t Struct Reference

Detailed description

Definition at line 90 of file synced_bcf_reader.h.

#include <synced_bcf_reader.h>

Public Members
int	collapse
char *	apply_filters
int	require_index
int	max_unpack
int *	has_line
bcf_sr_t *	readers
int	nreaders
int	streaming
int	explicit_regs
char **	samples
bcf_sr_regions_t *	regions
bcf_sr_regions_t *	targets
int	targets_als
kstring_t	tmps
int	n_smpl

Member Data Documentation

char* bcf_srs_t::apply_filters

Definition at line 94 of file synced_bcf_reader.h.

int bcf_srs_t::collapse

Definition at line 93 of file synced_bcf_reader.h.

int bcf_srs_t::explicit_regs

Definition at line 107 of file synced_bcf_reader.h.

int* bcf_srs_t::has_line

Definition at line 101 of file synced_bcf_reader.h.

int bcf_srs_t::max_unpack

Definition at line 100 of file synced_bcf_reader.h.

int bcf_srs_t::n_smpl

Definition at line 112 of file synced_bcf_reader.h.

int bcf_srs_t::nreaders

Definition at line 105 of file synced_bcf_reader.h.

bcf_sr_t* bcf_srs_t::readers

Definition at line 104 of file synced_bcf_reader.h.

bcf_sr_regions_t* bcf_srs_t::regions

Definition at line 109 of file synced_bcf_reader.h.

int bcf_srs_t::require_index

Definition at line 99 of file synced_bcf_reader.h.

char** bcf_srs_t::samples

Definition at line 108 of file synced_bcf_reader.h.

int bcf_srs_t::streaming

Definition at line 106 of file synced_bcf_reader.h.

bcf_sr_regions_t * bcf_srs_t::targets

Definition at line 109 of file synced_bcf_reader.h.

int bcf_srs_t::targets_als

Definition at line 110 of file synced_bcf_reader.h.

kstring_t bcf_srs_t::tmps

Definition at line 111 of file synced_bcf_reader.h.

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/contrib/htslib/htslib/synced_bcf_reader.h