All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Groups Pages
Static Public Members | List of all members
nvbio::aln::MyersTag< ALPHABET_SIZE_T > Struct Template Reference

Detailed description

template< uint32 ALPHABET_SIZE_T>
struct nvbio::aln::MyersTag< ALPHABET_SIZE_T >

Myers bit-vector algorithm.

Myers bit-vector algorithm, only supported for the EditDistanceAligner

Template Parameters
ALPHABET_SIZE_Tthe size of the alphabet, in symbols; currently there are fast specializations for alphabets of 2, 4 and 5 symbols.

Definition at line 87 of file alignment_base.h.

#include <alignment_base.h>

Static Public Members

static const uint32 ALPHABET_SIZE = ALPHABET_SIZE_T

Member Data Documentation

template<uint32 ALPHABET_SIZE_T>
const uint32 nvbio::aln::MyersTag< ALPHABET_SIZE_T >::ALPHABET_SIZE = ALPHABET_SIZE_T

Definition at line 87 of file alignment_base.h.

The documentation for this struct was generated from the following file: