nvbio::io::BNT Struct Reference

Detailed description

Encapsulates all sequence data required for alignment. This is a simple convenience wrapper for FMIndexData.

Definition at line 73 of file output_types.h.

#include <output_types.h>

Public Methods
	BNT (const io::ConstSequenceDataView &reference)

Public Members
uint32	n_seqs
const char *	names
const uint32 *	names_index
const uint32 *	sequence_index

Constructor & Destructor Documentation

nvbio::io::BNT::BNT ( const io::ConstSequenceDataView &  reference)

inline

Definition at line 80 of file output_types.h.

Member Data Documentation

uint32 nvbio::io::BNT::n_seqs

Definition at line 75 of file output_types.h.

const char* nvbio::io::BNT::names

Definition at line 76 of file output_types.h.

const uint32* nvbio::io::BNT::names_index

Definition at line 77 of file output_types.h.

const uint32* nvbio::io::BNT::sequence_index

Definition at line 78 of file output_types.h.

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/nvbio/io/output/output_types.h