nvbio::mem::mem_handler< coord_type > Struct Template Reference

Detailed description

template< typename coord_type>
struct nvbio::mem::mem_handler< coord_type >

Definition at line 363 of file mem_inl.h.

#include <mem_inl.h>

Public Types
typedef vector_type < coord_type, 2u >::type	range_type
typedef MEMRange< coord_type >	rank_type

Public Methods
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE	mem_handler (const uint32 _string_id, const uint32 _max_intv)
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	output (const range_type range, const uint2 span)

Public Members
const uint32	string_id
const uint32	max_intv
rank_type	mems [MAX_SIZE]
uint32	n_mems

Static Public Members
static const uint32	MAX_SIZE = 1024

Member Typedef Documentation

template<typename coord_type>

typedef vector_type<coord_type,2u>::type nvbio::mem::mem_handler< coord_type >::range_type

Definition at line 367 of file mem_inl.h.

template<typename coord_type>

typedef MEMRange<coord_type> nvbio::mem::mem_handler< coord_type >::rank_type

Definition at line 368 of file mem_inl.h.

Constructor & Destructor Documentation

template<typename coord_type>

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE nvbio::mem::mem_handler< coord_type >::mem_handler ( const uint32  _string_id, const uint32  _max_intv  )

inline

Definition at line 372 of file mem_inl.h.

Member Function Documentation

template<typename coord_type>

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void nvbio::mem::mem_handler< coord_type >::output ( const range_type  range, const uint2  span  )

inline

Definition at line 379 of file mem_inl.h.

Member Data Documentation

template<typename coord_type>

const uint32 nvbio::mem::mem_handler< coord_type >::max_intv

Definition at line 395 of file mem_inl.h.

template<typename coord_type>

const uint32 nvbio::mem::mem_handler< coord_type >::MAX_SIZE = 1024

static

Definition at line 365 of file mem_inl.h.

template<typename coord_type>

rank_type nvbio::mem::mem_handler< coord_type >::mems[MAX_SIZE]

Definition at line 396 of file mem_inl.h.

template<typename coord_type>

uint32 nvbio::mem::mem_handler< coord_type >::n_mems

Definition at line 397 of file mem_inl.h.

template<typename coord_type>

const uint32 nvbio::mem::mem_handler< coord_type >::string_id

Definition at line 394 of file mem_inl.h.

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/nvbio/fmindex/mem_inl.h