dcs.h File Reference

#include <nvbio/sufsort/sufsort_priv.h>
#include <nvbio/strings/string_set.h>
#include <nvbio/basic/thrust_view.h>
#include <thrust/host_vector.h>
#include <thrust/device_vector.h>
#include <thrust/iterator/constant_iterator.h>
#include <thrust/iterator/counting_iterator.h>
#include <nvbio/sufsort/dcs_inl.h>

Go to the source code of this file.

Classes
struct	nvbio::DCTable< Q >
struct	nvbio::DCTable< 64 >
struct	nvbio::DCTable< 128 >
struct	nvbio::DCTable< 256 >
struct	nvbio::DCTable< 512 >
struct	nvbio::DCTable< 1024 >
struct	nvbio::DCTable< 2048 >
struct	nvbio::DCSView
struct	nvbio::DCS
struct	nvbio::priv::DCS_predicate
struct	nvbio::priv::DCS_string_suffix_index
struct	nvbio::priv::DCS_string_suffix_less< SYMBOL_SIZE, string_type >

Namespaces
	nvbio
	Define a vector_view POD type and plain_view() for std::vector.
	nvbio::priv

Functions
DCSView	nvbio::plain_view (DCS &dcs)
DCSView	nvbio::plain_view (const DCS &dcs)