nvbio::SSA_index_multiple_device< K, index_type > Struct Template Reference

Detailed description

template< uint32 K, typename index_type = uint32>
struct nvbio::SSA_index_multiple_device< K, index_type >

Definition at line 93 of file ssa.h.

#include <ssa.h>

Public Types
typedef index_type	value_type
typedef SSA_index_multiple_context< K, const index_type * >	context_type
typedef context_type	device_view_type
typedef context_type	plain_view_type

Public Methods
	SSA_index_multiple_device ()
	SSA_index_multiple_device (const SSA_index_multiple< K, index_type > &ssa)
	~SSA_index_multiple_device ()
context_type	get_context () const

Public Members
index_type	m_n
thrust::device_vector< index_type >	m_ssa

Member Typedef Documentation

template<uint32 K, typename index_type = uint32>

typedef SSA_index_multiple_context<K, const index_type*> nvbio::SSA_index_multiple_device< K, index_type >::context_type

Definition at line 307 of file ssa.h.

template<uint32 K, typename index_type = uint32>

typedef context_type nvbio::SSA_index_multiple_device< K, index_type >::device_view_type

Definition at line 308 of file ssa.h.

template<uint32 K, typename index_type = uint32>

typedef context_type nvbio::SSA_index_multiple_device< K, index_type >::plain_view_type

Definition at line 309 of file ssa.h.

template<uint32 K, typename index_type = uint32>

typedef index_type nvbio::SSA_index_multiple_device< K, index_type >::value_type

Definition at line 306 of file ssa.h.

Constructor & Destructor Documentation

template<uint32 K, typename index_type = uint32>

nvbio::SSA_index_multiple_device< K, index_type >::SSA_index_multiple_device ( )

inline

empty constructor

Definition at line 313 of file ssa.h.

template<uint32 K, typename index_type >

nvbio::SSA_index_multiple_device< K, index_type >::SSA_index_multiple_device

(

const SSA_index_multiple< K, index_type > &

ssa)

constructor

Parameters

ssa	host sampled suffix array

Definition at line 345 of file ssa_inl.h.

template<uint32 K, typename index_type = uint32>

nvbio::SSA_index_multiple_device< K, index_type >::~SSA_index_multiple_device ( )

inline

destructor

Definition at line 331 of file ssa.h.

Member Function Documentation

template<uint32 K, typename index_type = uint32>

context_type nvbio::SSA_index_multiple_device< K, index_type >::get_context ( ) const

inline

get a context

Definition at line 340 of file ssa.h.

Member Data Documentation

template<uint32 K, typename index_type = uint32>

index_type nvbio::SSA_index_multiple_device< K, index_type >::m_n

Definition at line 342 of file ssa.h.

template<uint32 K, typename index_type = uint32>

thrust::device_vector<index_type> nvbio::SSA_index_multiple_device< K, index_type >::m_ssa

Definition at line 343 of file ssa.h.

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The documentation for this struct was generated from the following files:

• E:/git/nvbio/nvbio/fmindex/ssa.h
• E:/git/nvbio/nvbio/fmindex/ssa_inl.h