read_infixes Struct Reference

Detailed description

Definition at line 44 of file alignment.h.

#include <alignment.h>

Public Methods
NVBIO_HOST_DEVICE	read_infixes (const io::ConstSequenceDataView reads)
NVBIO_HOST_DEVICE string_infix_coord_type	operator() (const uint2 diagonal) const

Public Members
const io::ConstSequenceDataView	m_reads

Constructor & Destructor Documentation

NVBIO_HOST_DEVICE read_infixes::read_infixes ( const io::ConstSequenceDataView  reads)

inline

Definition at line 48 of file alignment.h.

Member Function Documentation

NVBIO_HOST_DEVICE string_infix_coord_type read_infixes::operator() ( const uint2  diagonal) const

inline

Definition at line 53 of file alignment.h.

Member Data Documentation

const io::ConstSequenceDataView read_infixes::m_reads

Definition at line 63 of file alignment.h.

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/examples/qmap/alignment.h