NVBIO: Namespace Members

NVBIO

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- a -

AllocPtr : mgpu

- b -

BamAlignmentVector : BamTools
BamBinMap : BamTools
BamIndex : BamTools
bidirectional_device_iterator_tag : nvbio
bidirectional_host_iterator_tag : nvbio
bidirectional_universal_iterator_tag : nvbio
byte : mgpu

- c -

ChunkVector : BamTools
column_type : nvbio::aln
ConstQGramIndexView : nvbio
ConstQGramSetIndexView : nvbio
ConstQGroupIndexView : nvbio
ConstSequenceDataView : nvbio::io
ContextPtr : mgpu
CounterT_default : nvbio

- d -

DeviceThreadScheduler : nvbio::aln
DeviceTimer : nvbio::bowtie2::cuda

- f -

forward_device_iterator_tag : nvbio
forward_host_iterator_tag : nvbio
forward_universal_iterator_tag : nvbio

- h -

HostMdsArray : nvbio::io

- i -

index_range : nvbio::priv::wtree
input_device_iterator_tag : nvbio
input_host_iterator_tag : nvbio
input_universal_iterator_tag : nvbio
int16 : mgpu , nvbio
int16_2 : nvbio
int16_3 : nvbio
int16_4 : nvbio
int32 : nvbio
int32_2 : nvbio
int32_3 : nvbio
int32_4 : nvbio
int64 : nvbio , mgpu
int64_2 : nvbio
int64_3 : nvbio
int64_4 : nvbio
int8 : nvbio
int8_2 : nvbio
int8_3 : nvbio
int8_4 : nvbio

- k -

KernelStats : nvbio::bowtie2::cuda

- l -

LdgSequenceDataView : nvbio::io
LinearOffsetVector : BamTools
long_string_infix_coord_type : nvbio
long_string_prefix_coord_type : nvbio
long_string_set_infix_coord_type : nvbio
long_string_set_prefix_coord_type : nvbio
long_string_set_suffix_coord_type : nvbio
long_string_suffix_coord_type : nvbio

- o -

output_device_iterator_tag : nvbio
output_host_iterator_tag : nvbio
output_universal_iterator_tag : nvbio

- q -

QGramIndexView : nvbio
QGramSetIndexView : nvbio
QGroupIndexView : nvbio

- r -

random_access_device_iterator_tag : nvbio
random_access_host_iterator_tag : nvbio
random_access_universal_iterator_tag : nvbio
ReadDataCore : nvbio::io
ReadDataCUDA : nvbio::io
ReadDataHost : nvbio::io
RefVector : BamTools

- s -

SequenceDataDevice : nvbio::io
SequenceDataHost : nvbio::io
SequenceDataStream : nvbio::io
SequenceDataView : nvbio::io
string_2bit_be : nvbio::priv
string_2bit_le : nvbio::priv
string_4bit_be : nvbio::priv
string_4bit_le : nvbio::priv
string_8bit_be : nvbio::priv
string_8bit_le : nvbio::priv
string_infix_coord_type : nvbio
string_prefix_coord_type : nvbio
string_set_2bit : nvbio::priv
string_set_2bit_be : nvbio::priv
string_set_2bit_u64_be : nvbio::priv
string_set_4bit : nvbio::priv
string_set_8bit : nvbio::priv
string_set_infix_coord_type : nvbio
string_set_prefix_coord_type : nvbio
string_set_suffix_coord_type : nvbio
string_suffix_coord_type : nvbio
symbol_range : nvbio::priv::wtree

- u -

uint : mgpu
uint16 : mgpu , nvbio
uint16_2 : nvbio
uint16_3 : nvbio
uint16_4 : nvbio
uint32 : nvbio
uint32_2 : nvbio
uint32_3 : nvbio
uint32_4 : nvbio
uint64 : mgpu , nvbio
uint64_2 : nvbio
uint64_3 : nvbio
uint64_4 : nvbio
uint8 : nvbio
uint8_2 : nvbio
uint8_3 : nvbio
uint8_4 : nvbio
ushort : mgpu