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nvbio::alndiff::DebugAlignmentStream Struct Reference

Detailed description

Definition at line 34 of file alignment_dbg.cpp.

Inheritance diagram for nvbio::alndiff::DebugAlignmentStream:
nvbio::alndiff::AlignmentStream

Classes

struct  Info
 

Public Methods

 DebugAlignmentStream (const char *file_name)
 
bool is_ok ()
 
uint32 next_batch (const uint32 count, Alignment *batch)
 
- Public Methods inherited from nvbio::alndiff::AlignmentStream
virtual ~AlignmentStream ()
 

Public Members

gzFile m_file
 

Constructor & Destructor Documentation

nvbio::alndiff::DebugAlignmentStream::DebugAlignmentStream ( const char *  file_name)
inline

Definition at line 60 of file alignment_dbg.cpp.

Member Function Documentation

bool nvbio::alndiff::DebugAlignmentStream::is_ok ( void  )
inlinevirtual

return if the stream is ok

Reimplemented from nvbio::alndiff::AlignmentStream.

Definition at line 67 of file alignment_dbg.cpp.

uint32 nvbio::alndiff::DebugAlignmentStream::next_batch ( const uint32  count,
Alignment batch 
)
inlinevirtual

get the next batch

Reimplemented from nvbio::alndiff::AlignmentStream.

Definition at line 71 of file alignment_dbg.cpp.

Member Data Documentation

gzFile nvbio::alndiff::DebugAlignmentStream::m_file

Definition at line 121 of file alignment_dbg.cpp.


The documentation for this struct was generated from the following file: