- s -

• sample() : nvbio
• save_bns() : nvbio
• save_boundary() : nvbio::aln
• save_Mth() : nvbio::aln
• save_occurrences() : nvbio
• scan() : nvbio::cuda
• scan_test() : nvbio::cuda
• scan_total() : nvbio::cuda
• scan_warp() : nvbio::cuda
• scan_warp_total() : nvbio::cuda
• score_all() : nvbio::bowtie2::cuda
• score_all_t() : nvbio::bowtie2::cuda
• score_best() : nvbio::bowtie2::cuda
• score_best_t() : nvbio::bowtie2::cuda
• score_reduce() : nvbio::bowtie2::cuda
• score_reduce_kernel() : nvbio::bowtie2::cuda::detail
• score_reduce_paired() : nvbio::bowtie2::cuda
• score_reduce_paired_kernel() : nvbio::bowtie2::cuda::detail
• score_reduce_paired_t() : nvbio::bowtie2::cuda
• score_reduce_t() : nvbio::bowtie2::cuda
• scoring_mode() : nvbio::bowtie2::cuda
• select() : nvbio , nvbio::bowtie2::cuda
• select_all() : nvbio::bowtie2::cuda
• select_init() : nvbio::bowtie2::cuda
• select_init_t() : nvbio::bowtie2::cuda
• select_kernel() : nvbio::bowtie2::cuda
• select_multi() : nvbio::bowtie2::cuda
• select_multi_kernel() : nvbio::bowtie2::cuda
• select_n_from_top_range_kernel() : nvbio::bowtie2::cuda
• select_t() : nvbio::bowtie2::cuda
• sequence_test() : nvbio
• serial_assign() : nvbio::priv
• set() : nvbio
• setup() : nvbio
• sgn() : nvbio
• sift_down() : boost::heap::interval_heap_internal , nvbio::heap::interval_heap_internal
• sift_leaf() : nvbio::heap::interval_heap_internal , boost::heap::interval_heap_internal , nvbio::heap::interval_heap_internal
• sift_leaf_max() : boost::heap::interval_heap_internal , nvbio::heap::interval_heap_internal
• sift_leaf_min() : boost::heap::interval_heap_internal , nvbio::heap::interval_heap_internal
• sift_up() : boost::heap::interval_heap_internal , nvbio::heap::interval_heap_internal
• simple_device_copy_kernel() : nvbio::priv
• skip() : nvbio::io
• smem_allocation_unit() : nvbio::cuda
• sort() : divsufsortxx::substring , divsufsortxx::doubling , divsufsortxx::tandemrepeat
• sort_interval_heap() : boost::heap , nvbio::heap
• sort_typeBstar() : divsufsortxx::core
• SpmvTest() : mgpu
• static_pointer_cast() : nvbio
• stats_string() : nvbio::alndiff
• store_deque() : nvbio::bowtie2::cuda::detail
• StoreBinaryMatrix() : mgpu
• string_batch_bound() : nvbio
• string_id() : nvbio
• string_option() : nvbio
• string_set_test() : nvbio
• string_to_dna() : nvbio
• string_to_iupac16() : nvbio
• stringprintf() : mgpu
• style() : nvbio::html
• suffix_sort() : nvbio::cuda
• sum_tree_test() : nvbio
• sw_alignment_score() : nvbio::aln::priv
• swap() : nvbio , nvbio::heap , nvbio , std , boost::container , std , nvbio
• symbols_per_word() : nvbio::priv
• syncblocks_test() : nvbio
• syncthreads() : nvbio::cuda